GNA11

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GNA11 mutation is significantly associated with the total protein of many other genes, with 13 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GNA11-associated genes across cancer lineages are VHL, JNK_pT183_Y185, and Ku80. Each is linked with GNA11 in more than 1 cancer types. Because this analysis shows association rather than direction, both GNA11-to-partner and partner-to-GNA11 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, VHL grouped by GNA11-low versus GNA11-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GNA11→partner) and Y-score (partner→GNA11) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECVHL →-1.015-3.321.002.01032
UCECJNK_pT183_Y185 →-0.200-2.308.018.03631
UCECKu80 →+0.246+2.335.038.02031
UCECp62 Lck ligand →+0.555+3.009<.001.01931
UCECSTAT3_pY705 →-0.400-3.169.002.01831
UCECATM →-0.560-2.321.013.03531
Each partner links to its Q-omics profile. Showing the 6 strongest of 13 associations by consensus.

VHL by GNA11 expression — UCEC

Box plot of VHL in GNA11-low vs GNA11-high samples in UCEC.

Explore this box plot interactively →

Exploration