GLDC

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GLDC RNA expression is significantly associated with the go_rna of many other GO terms, with 5,429 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible GLDC-associated GO terms across cancer lineages are Aminoacyl-tRNA metabolism involved in translational fidelity, Acute inflammatory response, and Regulation of transcription by RNA polymerase I. Each is linked with GLDC in more than 9 cancer types. Because this analysis shows association rather than direction, both GLDC-to-partner and partner-to-GLDC results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Aminoacyl-tRNA metabolism involved in translational fidelity grouped by GLDC-low versus GLDC-high in UPPER_AERODIGESTIVE_TRACT.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GLDC→partner) and Y-score (partner→GLDC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UPPER_AERODIGESTIVE_TRACTAminoacyl-tRNA metabolism involved in translational fidelity →+0.108+0.998<.001.005310
URINARY_TRACTAcute inflammatory response →-0.134-1.712.002.003310
BLOOD_LeukemiaRegulation of transcription by RNA polymerase I →+0.069+2.002<.001<.001310
SOFT_TISSUEAmino acid activation →+0.062+2.053<.001<.00139
SOFT_TISSUEtRNA aminoacylation →+0.062+2.053<.001<.00139
STOMACHPositive regulation of monoatomic ion transport →-0.126-2.358<.001.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,429 associations by consensus.

Aminoacyl-tRNA metabolism involved in translational fidelity by GLDC expression — UPPER_AERODIGESTIVE_TRACT

Box plot of Aminoacyl-tRNA metabolism involved in translational fidelity in GLDC-low vs GLDC-high samples in UPPER_AERODIGESTIVE_TRACT.

Explore this box plot interactively →

Exploration