GK5

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GK5 mutation is significantly associated with the total protein of many other genes, with 46 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GK5-associated genes across cancer lineages are EGFR_pY1068, EGFR_pY1173, and A-Raf_pS299. Each is linked with GK5 in more than 1 cancer types. Because this analysis shows association rather than direction, both GK5-to-partner and partner-to-GK5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, EGFR_pY1068 grouped by GK5-low versus GK5-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GK5→partner) and Y-score (partner→GK5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECEGFR_pY1068 →-0.234-2.000.009.00931
UCECEGFR_pY1173 →+0.062+1.306.031.03631
UCECA-Raf_pS299 →-0.120-2.115.005.01731
UCECFoxM1 →+0.237+2.807.011<.00131
UCECFOXO3a_pS318_S321 →-0.117-1.575.009.03431
UCECHER3_pY1289 →+0.069+2.999.026.03531
Each partner links to its Q-omics profile. Showing the 6 strongest of 46 associations by consensus.

EGFR_pY1068 by GK5 expression — UCEC

Box plot of EGFR_pY1068 in GK5-low vs GK5-high samples in UCEC.

Explore this box plot interactively →

Exploration