GJA3

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GJA3 mutation is significantly associated with the RNA expression of many other genes, with 17 significant associations in total. LUNG_NSCLC_LUAD shows the largest number of these associations.

The most reproducible GJA3-associated genes across cancer lineages are OR6B3, GOLGA6L1, and CABP5. Each is linked with GJA3 in more than 1 cancer types. Because this analysis shows association rather than direction, both GJA3-to-partner and partner-to-GJA3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR6B3 grouped by GJA3-low versus GJA3-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GJA3→partner) and Y-score (partner→GJA3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINOR6B3 →+0.081+4.437<.001.00431
SKINGOLGA6L1 →+0.010+3.684<.001.00631
LUNG_NSCLC_LUADCABP5 →+0.233+2.896<.001.00831
LUNG_NSCLC_LUADPSKH2 →+0.017+3.472<.001.00431
LUNG_NSCLC_LUADOR3A3 →+0.065+2.980<.001.00731
LUNG_NSCLC_LUADWFDC5 →+0.116+3.958.002.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 17 associations by consensus.

OR6B3 by GJA3 expression — SKIN

Box plot of OR6B3 in GJA3-low vs GJA3-high samples in SKIN.

Explore this box plot interactively →

Exploration