GJA3

mutation — cross-omics
Cross-omicsMUTATION → MUTATIONCell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GJA3 mutation is significantly associated with the mutation status of many other genes, with 1,729 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible GJA3-associated genes across cancer lineages are ZNF536, ZFP57, and SALL4. Each is linked with GJA3 in more than 3 cancer types. Because this analysis shows association rather than direction, both GJA3-to-partner and partner-to-GJA3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ZNF536 grouped by GJA3-low versus GJA3-high in SKIN.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GJA3→partner) and Y-score (partner→GJA3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKINZNF536 →+2.602+3.528.003.00314
OVARYZFP57 →+5.415+5.415.004.00414
LUNG_NSCLC_LUADSALL4 →+4.063+3.584.003.00313
LUNG_NSCLC_LUADUBR2 →+4.063+3.584.003.00313
OVARYPHKB →+4.415+4.977.007.00713
OVARYMORC1 →+5.415+5.415.004.00413
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,729 associations by consensus.

ZNF536 by GJA3 expression — SKIN

Box plot of ZNF536 in GJA3-low vs GJA3-high samples in SKIN.

Explore this box plot interactively →

Exploration