GID4

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GID4 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,588 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GID4-associated proteins across cancer lineages are CRK, FXR2, and METTL16. Each is linked with GID4 in more than 5 cancer types. Because this analysis shows association rather than direction, both GID4-to-partner and partner-to-GID4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GID4 versus CRK in BRCA, with a Pearson correlation of 0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GID4→partner) and Y-score (partner→GID4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCACRK →+0.245+0.426<.001<.00136
BRCAFXR2 →+0.357+0.528<.001<.00136
LUADMETTL16 →+0.273+0.398<.001<.00136
BRCANCOR1 →+0.269+0.452<.001<.00136
GBMLLGL1 →+0.357+0.282.006.00526
GBMYWHAE →+0.292+0.336<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,588 associations by consensus.

GID4 vs CRK — BRCA

Per-sample scatter of GID4 vs CRK in BRCA (Pearson r = 0.36).

Explore this scatter interactively →

Exploration