GGACT

Across TCGA cell cohorts, GGACT mutation is significantly associated with the RNA expression of many other genes, with 3 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible GGACT-associated genes across cancer lineages are CNBD1, OR2B3, and POTEB2. Each is linked with GGACT in more than 1 cancer types. Because this analysis shows association rather than direction, both GGACT-to-partner and partner-to-GGACT results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CNBD1 grouped by GGACT-low versus GGACT-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GGACT→partner) and Y-score (partner→GGACT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	CNBD1 →	+0.576	+4.977	<.001	.007	3	1
LARGE_INTESTINE	OR2B3 →	+0.022	+5.415	<.001	.004	3	1
LARGE_INTESTINE	POTEB2 →	+0.012	+5.415	<.001	.004	3	1

Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

CNBD1 by GGACT expression — LARGE_INTESTINE

Explore this box plot interactively →