GGA3

Across TCGA patient cohorts, GGA3 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,182 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GGA3-associated proteins across cancer lineages are ZNF830, SNRNP200, and SF3B3. Each is linked with GGA3 in more than 5 cancer types. Because this analysis shows association rather than direction, both GGA3-to-partner and partner-to-GGA3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GGA3 versus ZNF830 in GBM, with a Pearson correlation of 0.47.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GGA3→partner) and Y-score (partner→GGA3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	ZNF830 →	+0.310	+0.304	.001	<.001	3	6
LSCC	SNRNP200 →	+0.217	+0.370	<.001	<.001	3	6
COAD	SF3B3 →	+0.224	+0.656	<.001	<.001	3	5
GBM	SMC1A →	+0.315	+0.284	.003	<.001	3	5
GBM	SMC3 →	+0.300	+0.261	.002	.001	3	5
LSCC	TRRAP →	+0.161	+0.354	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,182 associations by consensus.

GGA3 vs ZNF830 — GBM

Explore this scatter interactively →