GGA3

Across TCGA cell cohorts, GGA3 RNA expression is significantly associated with the RNA expression of many other genes, with 11,284 significant associations in total. UPPER_AERODIGESTIVE_TRACT shows the largest number of these associations.

The most reproducible GGA3-associated genes across cancer lineages are BPTF, DDX42, and KANSL1. Each is linked with GGA3 in more than 19 cancer types. Because this analysis shows association rather than direction, both GGA3-to-partner and partner-to-GGA3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GGA3 versus BPTF in LUNG_NSCLC_LUSC, with a Pearson correlation of 0.83.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GGA3→partner) and Y-score (partner→GGA3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_NSCLC_LUSC	BPTF →	+1.108	+0.945	.001	.001	3	20
UPPER_AERODIGESTIVE_TRACT	DDX42 →	+0.927	+1.103	<.001	<.001	3	20
URINARY_TRACT	KANSL1 →	+0.856	+0.916	.003	<.001	3	19
BONE	CEP131 →	+1.332	+0.897	<.001	<.001	3	19
BONE	UBE2O →	+1.095	+1.002	<.001	<.001	3	19
BLOOD_Myeloma	KCTD2 →	+1.037	+0.813	<.001	<.001	3	19

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,284 associations by consensus.

GGA3 vs BPTF — LUNG_NSCLC_LUSC

Explore this scatter interactively →