GFRA3

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GFRA3 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,343 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible GFRA3-associated GO terms across cancer lineages are Aerobic electron transport chain, Spliceosomal conformational changes to generate catalytic conformation, and Spliceosome conformational change to release U4 (or U4atac) and U1 (or U11). Each is linked with GFRA3 in more than 11 cancer types. Because this analysis shows association rather than direction, both GFRA3-to-partner and partner-to-GFRA3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Aerobic electron transport chain grouped by GFRA3-low versus GFRA3-high in OVARY.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GFRA3→partner) and Y-score (partner→GFRA3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYAerobic electron transport chain →+0.083+0.392<.001.007311
LUNG_NSCLC_LUADSpliceosomal conformational changes to generate catalytic conformation →+0.077+0.254<.001.002311
LUNG_NSCLC_LUADSpliceosome conformational change to release U4 (or U4atac) and U1 (or U11) →+0.088+0.229<.001.005212
BREASTRNA splicing, via transesterification reactions →+0.075+0.490<.001.001211
BREASTRNA splicing, via transesterification reactions with bulged adenosine as nucleophile →+0.074+0.474<.001.002211
BREASTmRNA splicing, via spliceosome →+0.074+0.474<.001.002211
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,343 associations by consensus.

Aerobic electron transport chain by GFRA3 expression — OVARY

Box plot of Aerobic electron transport chain in GFRA3-low vs GFRA3-high samples in OVARY.

Explore this box plot interactively →

Exploration