GFER

Across TCGA patient cohorts, GFER protein abundance is significantly associated with the RNA expression of many other genes, with 10,639 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GFER-associated genes across cancer lineages are ARHGAP9, TOM1L1, and JMJD8. Each is linked with GFER in more than 3 cancer types. Because this analysis shows association rather than direction, both GFER-to-partner and partner-to-GFER results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GFER versus ARHGAP9 in UCEC, with a Pearson correlation of 0.27.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GFER→partner) and Y-score (partner→GFER) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	ARHGAP9 →	+0.746	+0.257	<.001	.004	3	4
OV	TOM1L1 →	-0.528	-0.428	.005	.009	3	3
BRCA	JMJD8 →	+0.906	+0.459	<.001	<.001	3	3
UCEC	CYTH4 →	+0.735	+0.227	<.001	<.001	3	3
LSCC	PIK3CG →	+0.556	+0.199	.003	.002	3	3
GBM	ZNF286A →	-0.450	-0.244	<.001	.005	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,639 associations by consensus.

GFER vs ARHGAP9 — UCEC

Explore this scatter interactively →