GDPD2

Across TCGA patient cohorts, GDPD2 protein abundance is significantly associated with the protein abundance of many other proteins, with 1,835 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GDPD2-associated proteins across cancer lineages are RETREG2, REXO1_S422, and RGN. Each is linked with GDPD2 in more than 1 cancer types. Because this analysis shows association rather than direction, both GDPD2-to-partner and partner-to-GDPD2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GDPD2 versus RETREG2 in GBM, with a Pearson correlation of 0.36.

protein abundance associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GDPD2→partner) and Y-score (partner→GDPD2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	RETREG2 →	+0.265	+0.549	<.001	<.001	3	1
GBM	REXO1_S422 →	-0.518	-0.635	<.001	<.001	3	1
GBM	RGN →	+0.501	+0.489	<.001	<.001	3	1
GBM	RNF2 →	-0.290	-0.396	<.001	.001	3	1
GBM	RNF20 →	-0.270	-0.655	<.001	<.001	3	1
GBM	RPRD2 →	-0.277	-0.545	<.001	<.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,835 associations by consensus.

GDPD2 vs RETREG2 — GBM

Explore this scatter interactively →