GDF9

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GDF9 mutation is significantly associated with the total protein of many other genes, with 33 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GDF9-associated genes across cancer lineages are p38-MAPK_pT180_Y182, Annexin-1, and ATM. Each is linked with GDF9 in more than 1 cancer types. Because this analysis shows association rather than direction, both GDF9-to-partner and partner-to-GDF9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, p38-MAPK_pT180_Y182 grouped by GDF9-low versus GDF9-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GDF9→partner) and Y-score (partner→GDF9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECp38-MAPK_pT180_Y182 →-0.523-2.156.001.00332
UCECAnnexin-1 →+0.563+2.019.004.01732
UCECATM →-0.521-2.662.002<.00132
UCEC4E-BP1_pT37_T46 →-0.362-3.571.010.00232
UCECEGFR_pY1068 →-0.259-2.169.005.00331
UCECFoxM1 →+0.238+2.662.014<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 33 associations by consensus.

p38-MAPK_pT180_Y182 by GDF9 expression — UCEC

Box plot of p38-MAPK_pT180_Y182 in GDF9-low vs GDF9-high samples in UCEC.

Explore this box plot interactively →

Exploration