GCOM2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GCOM2 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,106 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GCOM2-associated proteins across cancer lineages are PCBD1, KLF3_S250, and NCBP1_S22. Each is linked with GCOM2 in more than 2 cancer types. Because this analysis shows association rather than direction, both GCOM2-to-partner and partner-to-GCOM2 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GCOM2→partner) and Y-score (partner→GCOM2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACPCBD1 →-0.534-0.208.001.00933
OVKLF3_S250 →+0.531+0.511<.001.00133
BRCANCBP1_S22 →-0.702-0.727<.001<.00133
LSCCCXADR →+0.646+0.867.001<.00133
LSCCAZI2 →-0.207-0.493<.001<.00133
HNSCBAIAP2_S325 →+0.567+0.677<.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,106 associations by consensus.

Exploration