GCNT1P2

Across TCGA patient cohorts, GCNT1P2 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,124 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GCNT1P2-associated proteins across cancer lineages are LMBRD2, YBX3_S324, and UPP1. Each is linked with GCNT1P2 in more than 1 cancer types. Because this analysis shows association rather than direction, both GCNT1P2-to-partner and partner-to-GCNT1P2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GCNT1P2 versus LMBRD2 in GBM, with a Pearson correlation of 0.47.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GCNT1P2→partner) and Y-score (partner→GCNT1P2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	LMBRD2 →	+0.344	+0.358	<.001	<.001	3	2
GBM	YBX3_S324 →	-0.517	-0.331	.003	.005	3	2
GBM	UPP1 →	-0.639	-0.360	<.001	.002	3	2
LSCC	GOLPH3 →	+0.245	+0.620	.001	.005	3	2
GBM	NIBAN2 →	-0.367	-0.452	<.001	<.001	3	2
GBM	PCYT1A_S315 →	-0.436	-0.475	<.001	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,124 associations by consensus.

GCNT1P2 vs LMBRD2 — GBM

Explore this scatter interactively →