GCC2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GCC2 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,989 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible GCC2-associated proteins across cancer lineages are DDAH1, IDH1, and BPNT1. Each is linked with GCC2 in more than 4 cancer types. Because this analysis shows association rather than direction, both GCC2-to-partner and partner-to-GCC2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GCC2 versus DDAH1 in BRCA, with a Pearson correlation of 0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GCC2→partner) and Y-score (partner→GCC2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCADDAH1 →+0.566+0.479<.001<.00135
UCECIDH1 →+0.538+0.398.001<.00135
UCECBPNT1 →+0.391+0.455.004<.00135
PDACYME1L1 →-0.341-0.344<.001<.00134
BRCASLC2A1 →-1.008-0.781<.001<.00134
OVRPL12 →-0.241-0.732<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 13,989 associations by consensus.

GCC2 vs DDAH1 — BRCA

Per-sample scatter of GCC2 vs DDAH1 in BRCA (Pearson r = 0.40).

Explore this scatter interactively →

Exploration