GCC2

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, GCC2 RNA differs between tumor and matched normal tissue in 12 of 18 cancer types tested, making tumor–normal expression one of GCC2’s most consistent transcriptional readouts.

The strongest signal is observed in thyroid carcinoma (THCA), where GCC2 RNA is repressed in tumor relative to normal tissue. In most cancer types GCC2 is over-expressed in tumor, although a few such as THCA and KICH show the opposite, repressed pattern.

THCA, KICH, and UCEC are the cancer types where GCC2 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in GCC2 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
THCAAllAll−0.573<.0018view →
KICHFemaleII,III,IV−1.671<.0017view →
UCECAllAll−0.664.0016view →
CHOLMaleAll+2.048<.0015view →
LUSCAllAll−0.413<.0015view →
COADFemaleAll−0.775.0014view →
STADAllII,III,IV+0.705.0014view →
PAADMaleAll+0.620.0124view →
LIHCAllAll+0.383.0034view →
KIRPAllIV+0.705.0452view →
PRADAllAll+0.388.0012view →
KIRCMaleIII,IV−0.360.0432view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 12 strongest of 12 lineages.

GCC2–THCA

Tumor-vs-normal expression box plot for GCC2 RNA in THCA.

Open the THCA breakdown →

Exploration