GBAP1

Across TCGA patient cohorts, GBAP1 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,756 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GBAP1-associated proteins across cancer lineages are SETDB1, GATAD2B, and MEPCE. Each is linked with GBAP1 in more than 5 cancer types. Because this analysis shows association rather than direction, both GBAP1-to-partner and partner-to-GBAP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GBAP1 versus SETDB1 in COAD, with a Pearson correlation of 0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GBAP1→partner) and Y-score (partner→GBAP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	SETDB1 →	+0.393	+0.433	<.001	.001	3	6
GBM	GATAD2B →	+0.503	+0.568	<.001	<.001	3	6
LSCC	MEPCE →	+0.314	+0.528	<.001	<.001	3	6
LSCC	MSH6 →	+0.576	+0.504	<.001	<.001	3	6
BRCA	THOC2 →	+0.285	+0.732	<.001	<.001	3	5
GBM	THOC5 →	+0.303	+0.469	<.001	.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 12,756 associations by consensus.

GBAP1 vs SETDB1 — COAD

Explore this scatter interactively →