GATD3A

Across TCGA patient cohorts, GATD3A RNA expression is significantly associated with the go_rna of many other GO terms, with 4,052 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible GATD3A-associated GO terms across cancer lineages are Ribosomal small subunit assembly, Actin filament-based transport, and tRNA thio-modification. Each is linked with GATD3A in more than 14 cancer types. Because this analysis shows association rather than direction, both GATD3A-to-partner and partner-to-GATD3A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Ribosomal small subunit assembly grouped by GATD3A-low versus GATD3A-high in READ.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GATD3A→partner) and Y-score (partner→GATD3A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
READ	Ribosomal small subunit assembly →	-0.029	-0.715	<.001	<.001	3	15
THYM	Actin filament-based transport →	-0.051	-1.128	<.001	<.001	3	6
PAAD	tRNA thio-modification →	+0.036	+0.695	<.001	<.001	2	7
BRCA	Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) →	-0.015	-0.292	<.001	<.001	3	6
STAD	rRNA pseudouridine synthesis →	+0.023	+0.322	.003	.009	1	7
ESCA	Axonogenesis involved in innervation →	-0.039	-0.486	.002	.002	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,052 associations by consensus.

Ribosomal small subunit assembly by GATD3A expression — READ

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