GATA4

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GATA4 mutation is significantly associated with the total protein of many other genes, with 27 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GATA4-associated genes across cancer lineages are VHL, c-Met_pY1235, and Cyclin-E2. Each is linked with GATA4 in more than 1 cancer types. Because this analysis shows association rather than direction, both GATA4-to-partner and partner-to-GATA4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, VHL grouped by GATA4-low versus GATA4-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GATA4→partner) and Y-score (partner→GATA4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECVHL →-0.733-2.115.013.01932
UCECc-Met_pY1235 →+0.090+2.807.005.00332
UCECCyclin-E2 →+0.197+2.807.007.00332
UCECA-Raf_pS299 →-0.141-3.459.006.00531
UCECFOXO3a_pS318_S321 →-0.166-3.459.002.00531
UCECAcetyl-a-Tubulin-Lys40 →+0.442+1.884.046.03031
Each partner links to its Q-omics profile. Showing the 6 strongest of 27 associations by consensus.

VHL by GATA4 expression — UCEC

Box plot of VHL in GATA4-low vs GATA4-high samples in UCEC.

Explore this box plot interactively →

Exploration