GATA1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, GATA1 RNA differs between tumor and matched normal tissue in 9 of 18 cancer types tested, making tumor–normal expression one of GATA1’s most consistent transcriptional readouts.

The strongest signal is observed in lung adenocarcinoma (LUAD), where GATA1 RNA is repressed in tumor relative to normal tissue. In most cancer types GATA1 is over-expressed in tumor, although a few such as LUAD and LUSC show the opposite, repressed pattern.

LUAD, LUSC, and BLCA are the cancer types where GATA1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in GATA1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LUADFemaleIII,IV−0.913<.00111view →
LUSCAllIII,IV−0.991<.0018view →
BLCAMaleIV−0.805<.0018view →
UCECAllAll−0.395<.0016view →
KIRCMaleAll+0.178<.0014view →
KICHAllAll−0.112.0074view →
PRADAllAll−0.080.0482view →
THCAFemaleII,III,IV−0.107.0441view →
LIHCMaleAll−0.048.0251view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 9 strongest of 9 lineages.

GATA1–LUAD

Tumor-vs-normal expression box plot for GATA1 RNA in LUAD.

Open the LUAD breakdown →

Exploration