GAPT

Across TCGA patient cohorts, GAPT protein abundance is significantly associated with the RNA expression of many other genes, with 401 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GAPT-associated genes across cancer lineages are SLC8A3, HM13, and AHCY. Each is linked with GAPT in more than 1 cancer types. Because this analysis shows association rather than direction, both GAPT-to-partner and partner-to-GAPT results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GAPT versus SLC8A3 in GBM, with a Pearson correlation of 0.49.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GAPT→partner) and Y-score (partner→GAPT) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	SLC8A3 →	+1.405	+0.727	.004	.001	3	1
GBM	HM13 →	-0.463	-0.573	.008	.002	3	1
GBM	AHCY →	-0.456	-0.689	<.001	<.001	3	1
GBM	TNFSF13B →	+0.779	+0.556	.002	.002	3	1
GBM	SGK3 →	+0.491	+0.491	.008	.009	3	1
GBM	PPP1R37 →	-0.439	-0.571	<.001	.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 401 associations by consensus.

GAPT vs SLC8A3 — GBM

Explore this scatter interactively →