GAMTP2

Across TCGA patient cohorts, GAMTP2 RNA expression is significantly associated with the go_rna of many other GO terms, with 6,779 significant associations in total. STAD shows the largest number of these associations.

The most reproducible GAMTP2-associated GO terms across cancer lineages are Regulation of microtubule polymerization, Sensory organ morphogenesis, and Protein localization to cell-cell junction. Each is linked with GAMTP2 in more than 9 cancer types. Because this analysis shows association rather than direction, both GAMTP2-to-partner and partner-to-GAMTP2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of microtubule polymerization grouped by GAMTP2-low versus GAMTP2-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GAMTP2→partner) and Y-score (partner→GAMTP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Regulation of microtubule polymerization →	+0.083	+0.143	<.001	<.001	3	10
STAD	Sensory organ morphogenesis →	+0.044	+0.122	<.001	<.001	3	9
STAD	Protein localization to cell-cell junction →	+0.101	+0.134	<.001	<.001	3	9
STAD	Phosphatidylglycerol biosynthetic process →	+0.062	+0.104	<.001	<.001	3	9
STAD	ER overload response →	+0.084	+0.137	<.001	<.001	3	9
STAD	Insulin receptor signaling pathway →	+0.086	+0.113	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,779 associations by consensus.

Regulation of microtubule polymerization by GAMTP2 expression — STAD

Explore this box plot interactively →