GALNT4

Across TCGA patient cohorts, GALNT4 mutation is significantly associated with the RNA expression of many other genes, with 3 significant associations in total. COAD shows the largest number of these associations.

The most reproducible GALNT4-associated genes across cancer lineages are RNU6-1313P, RNU6-533P, and C2orf69P4. Each is linked with GALNT4 in more than 1 cancer types. Because this analysis shows association rather than direction, both GALNT4-to-partner and partner-to-GALNT4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNU6-1313P grouped by GALNT4-low versus GALNT4-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GALNT4→partner) and Y-score (partner→GALNT4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
COAD	RNU6-1313P →	+0.593	+7.741	<.001	.009	3	1
COAD	RNU6-533P →	+0.571	+7.741	<.001	.009	3	1
COAD	C2orf69P4 →	+0.084	+7.741	<.001	.009	3	1

Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

RNU6-1313P by GALNT4 expression — COAD

Explore this box plot interactively →