GALNT16

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GALNT16 mutation is significantly associated with the RNA expression of many other genes, with 13 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible GALNT16-associated genes across cancer lineages are CXorf51A, ASZ1, and OR52B4. Each is linked with GALNT16 in more than 1 cancer types. Because this analysis shows association rather than direction, both GALNT16-to-partner and partner-to-GALNT16 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CXorf51A grouped by GALNT16-low versus GALNT16-high in LUNG_SCLC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GALNT16→partner) and Y-score (partner→GALNT16) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCCXorf51A →+0.083+3.523<.001.00832
LUNG_SCLCASZ1 →+0.050+4.169<.001.00131
LUNG_SCLCOR52B4 →+0.014+4.058<.001.00731
LUNG_SCLCUSP17L15 →+0.026+5.232<.001<.00131
LUNG_SCLCSCYGR10 →+0.208+3.817<.001.00431
BLOOD_LymphomaKLHL40 →+0.006+5.209.006.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 13 associations by consensus.

CXorf51A by GALNT16 expression — LUNG_SCLC

Box plot of CXorf51A in GALNT16-low vs GALNT16-high samples in LUNG_SCLC.

Explore this box plot interactively →

Exploration