GALNT12

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GALNT12 protein abundance is significantly associated with the RNA expression of many other genes, with 6,920 significant associations in total. COAD shows the largest number of these associations.

The most reproducible GALNT12-associated genes across cancer lineages are GOLM1, ENTPD8, and CORO2A. Each is linked with GALNT12 in more than 4 cancer types. Because this analysis shows association rather than direction, both GALNT12-to-partner and partner-to-GALNT12 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GALNT12 versus GOLM1 in COAD, with a Pearson correlation of 0.43.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GALNT12→partner) and Y-score (partner→GALNT12) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADGOLM1 →+1.062+0.453<.001<.00135
PDACENTPD8 →+0.912+0.463<.001<.00135
UCECCORO2A →+0.853+0.518.003.00934
UCECERGIC1 →+0.609+0.587<.001<.00134
UCECTSPAN1 →+1.459+0.492.005.00734
UCECSMIM14 →+1.034+0.714<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,920 associations by consensus.

GALNT12 vs GOLM1 — COAD

Per-sample scatter of GALNT12 vs GOLM1 in COAD (Pearson r = 0.43).

Explore this scatter interactively →

Exploration