GALNT12

Across TCGA cell cohorts, GALNT12 mutation is significantly associated with the RNA expression of many other genes, with 3 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible GALNT12-associated genes across cancer lineages are KRT71, C6orf118, and GPR171. Each is linked with GALNT12 in more than 1 cancer types. Because this analysis shows association rather than direction, both GALNT12-to-partner and partner-to-GALNT12 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, KRT71 grouped by GALNT12-low versus GALNT12-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GALNT12→partner) and Y-score (partner→GALNT12) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BLOOD_Leukemia	KRT71 →	+0.066	+4.922	<.001	.009	3	1
LARGE_INTESTINE	C6orf118 →	+0.190	+3.793	<.001	.007	3	1
LARGE_INTESTINE	GPR171 →	+0.027	+4.688	<.001	<.001	3	1

Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

KRT71 by GALNT12 expression — BLOOD_Leukemia

Explore this box plot interactively →