GAGE2A

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, GAGE2A RNA expression is significantly associated with the go_rna of many other GO terms, with 345 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible GAGE2A-associated GO terms across cancer lineages are Regulation of telomere maintenance via telomerase, Establishment of protein localization to vacuole, and Nuclear body organization. Each is linked with GAGE2A in more than 2 cancer types. Because this analysis shows association rather than direction, both GAGE2A-to-partner and partner-to-GAGE2A results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (GAGE2A→partner) and Y-score (partner→GAGE2A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CNSRegulation of telomere maintenance via telomerase →+0.037+1.148<.001<.00133
CNSEstablishment of protein localization to vacuole →+0.044+1.803.003.00533
LIVERNuclear body organization →+0.120+4.280.002.00433
SKINNegative regulation of protein processing →+0.104+2.205.001.00133
SKINNegative regulation of protein maturation →+0.115+2.645.001.00233
SKINCytoplasmic translation →+0.041+1.990.003.00233
Each partner links to its Q-omics profile. Showing the 6 strongest of 345 associations by consensus.

Exploration