Across TCGA cell cohorts, GAGE12E RNA expression is significantly associated with the mutation status of many other genes, with 133 significant associations in total. SOFT_TISSUE shows the largest number of these associations.

The most reproducible GAGE12E-associated genes across cancer lineages are GSE1, NEMF, and LRP2. Each is linked with GAGE12E in more than 1 cancer types. Because this analysis shows association rather than direction, both GAGE12E-to-partner and partner-to-GAGE12E results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GAGE12E→partner) and Y-score (partner→GAGE12E) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_NSCLC_LUSC	GSE1 →	+4.643	+0.076	.008	<.001	3	2
SOFT_TISSUE	NEMF →	+4.930	+0.090	.008	<.001	3	2
SOFT_TISSUE	LRP2 →	+3.193	+0.043	.004	<.001	3	2
BLOOD_Lymphoma	MLLT6 →	+3.459	+0.676	.004	<.001	3	2
BLOOD_Lymphoma	ROS1 →	+3.459	+0.721	.004	<.001	3	2
LUNG_SCLC	ITIH6 →	+3.459	+1.043	.003	<.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 133 associations by consensus.

Exploration

GAGE12E survival (RNA) · tumor vs normal (RNA) · all GAGE12E data types