GAGE12C

Across TCGA patient cohorts, GAGE12C RNA expression is significantly associated with the mutation status of many other genes, with 4 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible GAGE12C-associated genes across cancer lineages are KCNA1, FKBP11, and IER2. Each is linked with GAGE12C in more than 1 cancer types. Because this analysis shows association rather than direction, both GAGE12C-to-partner and partner-to-GAGE12C results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, KCNA1 grouped by GAGE12C-low versus GAGE12C-high in SKCM.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GAGE12C→partner) and Y-score (partner→GAGE12C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SKCM	KCNA1 →	+4.173	+0.020	.003	<.001	3	1
SKCM	FKBP11 →	+7.816	+0.204	.008	<.001	3	1
SKCM	IER2 →	+7.816	+0.204	.008	<.001	3	1
SKCM	AMY2B →	+5.232	+0.039	<.001	<.001	3	1

Each partner links to its Q-omics profile. Showing the 4 strongest of 4 associations by consensus.

KCNA1 by GAGE12C expression — SKCM

Explore this box plot interactively →