GABRP

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GABRP protein abundance is significantly associated with the RNA expression of many other genes, with 396 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible GABRP-associated genes across cancer lineages are OCA2, RPSAP49, and RNU1-155P. Each is linked with GABRP in more than 1 cancer types. Because this analysis shows association rather than direction, both GABRP-to-partner and partner-to-GABRP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GABRP versus OCA2 in BRCA, with a Pearson correlation of 0.92.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (GABRP→partner) and Y-score (partner→GABRP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAOCA2 →+0.395+0.575<.001.00631
BRCARPSAP49 →+0.435+0.590.001.00431
BRCARNU1-155P →+1.530+0.553<.001<.00131
BRCALINC01973 →+0.145+0.590.001.00421
BRCAFGF12-AS3 →+0.905+0.549<.001.00121
BRCAAKR1D1P1 →+0.345+0.549<.001.00121
Each partner links to its Q-omics profile. Showing the 6 strongest of 396 associations by consensus.

GABRP vs OCA2 — BRCA

Per-sample scatter of GABRP vs OCA2 in BRCA (Pearson r = 0.92).

Explore this scatter interactively →

Exploration