GABPB1-IT1

Across TCGA patient cohorts, GABPB1-IT1 RNA expression is significantly associated with the protein abundance of many other proteins, with 13,976 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GABPB1-IT1-associated proteins across cancer lineages are HDGFL3, ANP32A, and SIN3A. Each is linked with GABPB1-IT1 in more than 6 cancer types. Because this analysis shows association rather than direction, both GABPB1-IT1-to-partner and partner-to-GABPB1-IT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GABPB1-IT1 versus HDGFL3 in BRCA, with a Pearson correlation of 0.48.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GABPB1-IT1→partner) and Y-score (partner→GABPB1-IT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	HDGFL3 →	+0.709	+0.557	<.001	<.001	3	7
OV	ANP32A →	+0.651	+0.571	<.001	.001	3	7
GBM	SIN3A →	+0.299	+0.421	<.001	<.001	3	6
GBM	RTF1 →	+0.328	+0.441	.002	.001	3	6
OV	ERO1A →	-0.514	-0.556	<.001	.003	3	6
LSCC	GABPA →	+0.296	+0.550	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest of 13,976 associations by consensus.

GABPB1-IT1 vs HDGFL3 — BRCA

Explore this scatter interactively →