FRMD6-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, FRMD6-AS1 RNA differs between tumor and matched normal tissue in 11 of 18 cancer types tested, making tumor–normal expression one of FRMD6-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in lung squamous cell carcinoma (LUSC), where FRMD6-AS1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types FRMD6-AS1 is over-expressed in tumor, although a few such as THCA and KIRC show the opposite, repressed pattern.

LUSC, THCA, and LIHC are the cancer types where FRMD6-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in FRMD6-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LUSCAllII,III,IV+0.953<.0018view →
THCAAllAll−0.247<.0017view →
LIHCAllAll+0.089<.0017view →
BLCAAllAll+0.464.0026view →
HNSCAllIII,IV+0.306.0046view →
KIRCAllII,III,IV−0.200.0015view →
UCECAllAll−0.323.0134view →
LUADAllAll+0.290<.0014view →
CHOLAllAll+0.867<.0013view →
KIRPAllII,III,IV+0.396.0253view →
KICHAllAll−0.331.0162view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 11 strongest of 11 lineages.

FRMD6-AS1–LUSC

Tumor-vs-normal expression box plot for FRMD6-AS1 RNA in LUSC.

Open the LUSC breakdown →

Exploration