FOXR1

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FOXR1 mutation is significantly associated with the total protein of many other genes, with 19 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FOXR1-associated genes across cancer lineages are TSC1, eEF2, and EGFR_pY1068. Each is linked with FOXR1 in more than 1 cancer types. Because this analysis shows association rather than direction, both FOXR1-to-partner and partner-to-FOXR1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TSC1 grouped by FOXR1-low versus FOXR1-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FOXR1→partner) and Y-score (partner→FOXR1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECTSC1 →-0.207-2.321.016.03532
UCECeEF2 →+0.511+2.321.004.03531
UCECEGFR_pY1068 →-0.367-3.459.003.00531
UCECGAPDH →+0.579+2.321.031.03531
UCECINPP4B →-0.368-2.999.023.03531
UCECp62 Lck ligand →+0.384+2.179.018.03431
Each partner links to its Q-omics profile. Showing the 6 strongest of 19 associations by consensus.

TSC1 by FOXR1 expression — UCEC

Box plot of TSC1 in FOXR1-low vs FOXR1-high samples in UCEC.

Explore this box plot interactively →

Exploration