FOXO4

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FOXO4 mutation is significantly associated with the RNA expression of many other genes, with 3,683 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FOXO4-associated genes across cancer lineages are RPL17P14, FAM27B, and YTHDF3-AS1. Each is linked with FOXO4 in more than 2 cancer types. Because this analysis shows association rather than direction, both FOXO4-to-partner and partner-to-FOXO4 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FOXO4→partner) and Y-score (partner→FOXO4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMRPL17P14 →+0.061+4.884<.001.00433
BRCAFAM27B →+0.086+4.453<.001.00532
UCECYTHDF3-AS1 →+0.657+2.024<.001<.00132
UCECCCL5 →+0.917+2.662<.001<.00132
UCECRNA5SP411 →+0.673+1.393<.001.00532
UCECTRAC →+0.766+2.321.002.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,683 associations by consensus.

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