FOXN1

Across TCGA patient cohorts, FOXN1 RNA expression is significantly associated with the protein abundance of many other proteins, with 8,135 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible FOXN1-associated proteins across cancer lineages are SBSN, SLC9A3R1, and SNX4. Each is linked with FOXN1 in more than 3 cancer types. Because this analysis shows association rather than direction, both FOXN1-to-partner and partner-to-FOXN1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FOXN1 versus SBSN in LSCC, with a Pearson correlation of 0.47.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (FOXN1→partner) and Y-score (partner→FOXN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	SBSN →	+1.022	+0.868	<.001	<.001	3	3
BRCA	SLC9A3R1 →	+0.799	+0.479	<.001	<.001	3	3
HNSC	SNX4 →	-0.223	-1.406	<.001	<.001	3	3
LSCC	BNIPL_S88 →	+1.091	+1.298	<.001	<.001	3	3
HNSC	C6orf132_S373 →	+0.952	+1.077	<.001	<.001	3	3
BRCA	CDK12_S423 →	+0.449	+0.376	<.001	.005	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,135 associations by consensus.

FOXN1 vs SBSN — LSCC

Explore this scatter interactively →