FOXG1-AS1

Across TCGA pan-cancer cohorts, FOXG1-AS1 RNA differs between tumor and matched normal tissue in 4 of 18 cancer types tested, making tumor–normal expression one of FOXG1-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in colon adenocarcinoma (COAD), where FOXG1-AS1 RNA is more highly expressed in tumor relative to normal tissue. In most cancer types FOXG1-AS1 is over-expressed in tumor, although a few such as ESCA and KICH show the opposite, repressed pattern.

COAD, ESCA, and KICH are the cancer types where FOXG1-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in FOXG1-AS1 RNA (log₂); positive values indicate higher expression in tumor. p-values are from the differential-expression test.

Lineage	Gender	Stage	Fold-change	p	Sampling consensus
COAD	Male	II,III,IV	+0.241	.008	4	view →
ESCA	All	All	−0.868	.021	1	view →
KICH	Male	All	−0.034	.031	1	view →
LUSC	All	II,III,IV	+0.017	.041	1	view →

Pink = over-expressed in tumor, green = repressed in tumor. Showing the 4 strongest of 4 lineages.

FOXG1-AS1–COAD

Open the COAD breakdown →