FOXD2

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FOXD2 mutation is significantly associated with the RNA expression of many other genes, with 1,089 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FOXD2-associated genes across cancer lineages are POU5F1P2, LINC01758, and RPL31P47. Each is linked with FOXD2 in more than 1 cancer types. Because this analysis shows association rather than direction, both FOXD2-to-partner and partner-to-FOXD2 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FOXD2→partner) and Y-score (partner→FOXD2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLCAPOU5F1P2 →+0.063+5.899<.001.00232
UCECLINC01758 →+0.189+2.397<.001.00332
BLCARPL31P47 →+0.228+5.177.001.00732
UCECNUTF2P8 →+0.121+2.845<.001.00131
UCECCHASERR →+0.647+3.491.002.00231
UCECRN7SL248P →+0.077+3.606<.001.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,089 associations by consensus.

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