FOXA2

Across TCGA cell cohorts, FOXA2 RNA expression is significantly associated with the RNA expression of many other genes, with 5,304 significant associations in total. LUNG_SCLC shows the largest number of these associations.

The most reproducible FOXA2-associated genes across cancer lineages are UNC5CL, FOXP1, and PROX1. Each is linked with FOXA2 in more than 5 cancer types. Because this analysis shows association rather than direction, both FOXA2-to-partner and partner-to-FOXA2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FOXA2 versus UNC5CL in STOMACH, with a Pearson correlation of 0.43.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FOXA2→partner) and Y-score (partner→FOXA2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STOMACH	UNC5CL →	+1.621	+2.397	<.001	<.001	3	6
STOMACH	FOXP1 →	+1.757	+2.603	.001	.004	3	6
LIVER	PROX1 →	+2.691	+3.074	<.001	<.001	3	6
LIVER	SLC43A1 →	+2.920	+3.108	<.001	<.001	3	5
LUNG_NSCLC_LUSC	MANSC1 →	+2.785	+3.271	<.001	<.001	3	5
LUNG_SCLC	TFF3 →	+4.470	+3.827	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,304 associations by consensus.

FOXA2 vs UNC5CL — STOMACH

Explore this scatter interactively →