Across TCGA patient cohorts, FOCAD-AS1 RNA expression is significantly associated with the mutation status of many other genes, with 11,021 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FOCAD-AS1-associated genes across cancer lineages are TP53, EPHB1, and ZNF423. Each is linked with FOCAD-AS1 in more than 6 cancer types. Because this analysis shows association rather than direction, both FOCAD-AS1-to-partner and partner-to-FOCAD-AS1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FOCAD-AS1→partner) and Y-score (partner→FOCAD-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	TP53 →	+1.260	+0.256	.002	.005	2	7
SKCM	EPHB1 →	+1.885	+0.168	.006	.009	3	4
UCEC	ZNF423 →	+1.608	+0.344	.001	<.001	3	4
UCEC	DNAH5 →	+1.032	+0.266	<.001	<.001	3	4
UCEC	RB1 →	+1.517	+0.421	<.001	<.001	3	3
UCEC	EGF →	+2.119	+0.445	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,021 associations by consensus.

Exploration

FOCAD-AS1 survival (RNA) · tumor vs normal (RNA) · all FOCAD-AS1 data types