FNDC8

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FNDC8 protein abundance is significantly associated with the RNA expression of many other genes, with 471 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible FNDC8-associated genes across cancer lineages are GZMB, VRK1, and TNFSF13B. Each is linked with FNDC8 in more than 1 cancer types. Because this analysis shows association rather than direction, both FNDC8-to-partner and partner-to-FNDC8 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FNDC8 versus GZMB in BRCA, with a Pearson correlation of 0.52.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FNDC8→partner) and Y-score (partner→FNDC8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAGZMB →+2.214+0.964<.001.00131
BRCAVRK1 →+0.743+0.601.002.00731
BRCATNFSF13B →+0.971+0.781.005.00531
BRCAACOD1 →+0.246+0.674.004.00331
BRCACCDC113 →-0.684-0.622.005.00631
BRCAANKMY2 →-0.830-1.100.004.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 471 associations by consensus.

FNDC8 vs GZMB — BRCA

Per-sample scatter of FNDC8 vs GZMB in BRCA (Pearson r = 0.52).

Explore this scatter interactively →

Exploration