FNDC8

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FNDC8 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,781 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible FNDC8-associated GO terms across cancer lineages are Negative regulation of DNA-templated transcription, elongation, Epigenetic regulation of gene expression, and Regulation of cytoplasmic pattern recognition receptor signaling pathway. Each is linked with FNDC8 in more than 10 cancer types. Because this analysis shows association rather than direction, both FNDC8-to-partner and partner-to-FNDC8 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Negative regulation of DNA-templated transcription, elongation grouped by FNDC8-low versus FNDC8-high in STOMACH.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FNDC8→partner) and Y-score (partner→FNDC8) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
STOMACHNegative regulation of DNA-templated transcription, elongation →+0.103+0.069<.001<.001311
LUNG_SCLCEpigenetic regulation of gene expression →+0.060+0.096<.001<.00139
BONERegulation of cytoplasmic pattern recognition receptor signaling pathway →+0.054+0.092.001.00739
LUNG_SCLCRegulation of DNA-templated DNA replication →+0.079+0.113<.001.00339
BLOOD_LymphomaU2-type prespliceosome assembly →+0.110+0.155<.001<.00139
BLOOD_LymphomaNegative regulation of RNA splicing →+0.098+0.160<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,781 associations by consensus.

Negative regulation of DNA-templated transcription, elongation by FNDC8 expression — STOMACH

Box plot of Negative regulation of DNA-templated transcription, elongation in FNDC8-low vs FNDC8-high samples in STOMACH.

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Exploration