FN3KRP

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FN3KRP mutation is significantly associated with the RNA expression of many other genes, with 152 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FN3KRP-associated genes across cancer lineages are RPL32P19, RNA5SP351, and RNU7-175P. Each is linked with FN3KRP in more than 1 cancer types. Because this analysis shows association rather than direction, both FN3KRP-to-partner and partner-to-FN3KRP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RPL32P19 grouped by FN3KRP-low versus FN3KRP-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FN3KRP→partner) and Y-score (partner→FN3KRP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADRPL32P19 →+0.355+5.017<.001.00932
LUADRNA5SP351 →+0.503+4.243.001.00832
LUADRNU7-175P →+0.680+4.821.008.00332
HNSCCTHRC1P1 →+0.127+5.822<.001.00332
HNSCTRAJ52 →+0.439+5.241<.001.00732
UCECTRAJ21 →+0.994+3.936<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 152 associations by consensus.

RPL32P19 by FN3KRP expression — COAD

Box plot of RPL32P19 in FN3KRP-low vs FN3KRP-high samples in COAD.

Explore this box plot interactively →

Exploration