FN3KRP

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FN3KRP mutation is significantly associated with the total protein of many other genes, with 6 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FN3KRP-associated genes across cancer lineages are Myosin-IIa, SF2, and IGFBP2. Each is linked with FN3KRP in more than 1 cancer types. Because this analysis shows association rather than direction, both FN3KRP-to-partner and partner-to-FN3KRP results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Myosin-IIa grouped by FN3KRP-low versus FN3KRP-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FN3KRP→partner) and Y-score (partner→FN3KRP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMyosin-IIa →+0.222+3.007.038.01921
UCECSF2 →-0.129-2.986.042.03721
UCECIGFBP2 →-0.917-3.000.014.03711
UCECMSH6 →-0.632-3.000<.001.03711
UCECPDK1_pS241 →+0.272+3.013.005.01911
UCECAnnexin-1 →+0.918+3.000.002.03711
Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

Myosin-IIa by FN3KRP expression — UCEC

Box plot of Myosin-IIa in FN3KRP-low vs FN3KRP-high samples in UCEC.

Explore this box plot interactively →

Exploration