FGD1

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FGD1 mutation is significantly associated with the RNA expression of many other genes, with 5,117 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FGD1-associated genes across cancer lineages are MORC4, KLRD1, and PINCR. Each is linked with FGD1 in more than 2 cancer types. Because this analysis shows association rather than direction, both FGD1-to-partner and partner-to-FGD1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MORC4 grouped by FGD1-low versus FGD1-high in COAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FGD1→partner) and Y-score (partner→FGD1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADMORC4 →+0.836+3.200<.001.00933
UCECKLRD1 →+0.291+2.362<.001<.00133
UCECPINCR →+0.173+1.480<.001<.00133
CESCKRT26 →+0.556+3.567<.001.00432
CESCMIR7-3 →+0.179+4.342<.001.00732
CESCSNORD115-45 →+0.303+4.342<.001.00732
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,117 associations by consensus.

MORC4 by FGD1 expression — COAD

Box plot of MORC4 in FGD1-low vs FGD1-high samples in COAD.

Explore this box plot interactively →

Exploration