FGB

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FGB mutation is significantly associated with the RNA expression of many other genes, with 1,737 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FGB-associated genes across cancer lineages are SNRPBP1, RPS12P15, and MYO19. Each is linked with FGB in more than 3 cancer types. Because this analysis shows association rather than direction, both FGB-to-partner and partner-to-FGB results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, SNRPBP1 grouped by FGB-low versus FGB-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FGB→partner) and Y-score (partner→FGB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMSNRPBP1 →+0.091+2.476.004.00734
COADRPS12P15 →+0.168+4.693<.001.00732
UCECMYO19 →+0.418+2.000.003.00332
SKCMLINC02321 →+1.242+3.353<.001.00532
UCECMRPS11 →+0.471+3.949<.001<.00132
UCECTANGO2 →+0.403+3.949<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,737 associations by consensus.

SNRPBP1 by FGB expression — SKCM

Box plot of SNRPBP1 in FGB-low vs FGB-high samples in SKCM.

Explore this box plot interactively →

Exploration