FCN3

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FCN3 RNA expression is significantly associated with the protein abundance of many other proteins, with 12,904 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible FCN3-associated proteins across cancer lineages are SHANK3_S1413, TNS2_S102, and DYSF. Each is linked with FCN3 in more than 5 cancer types. Because this analysis shows association rather than direction, both FCN3-to-partner and partner-to-FCN3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FCN3 versus SHANK3_S1413 in LSCC, with a Pearson correlation of 0.54.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (FCN3→partner) and Y-score (partner→FCN3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCSHANK3_S1413 →+0.803+1.197<.001<.00136
LSCCTNS2_S102 →+0.592+0.973<.001<.00135
GBMDYSF →+0.462+0.483<.001<.00135
LSCCGIMAP8 →+0.427+1.034<.001<.00135
LUADTNS2_S648 →+0.547+1.121<.001.00134
CCRCCTNS2_S941 →+0.596+1.380<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 12,904 associations by consensus.

FCN3 vs SHANK3_S1413 — LSCC

Per-sample scatter of FCN3 vs SHANK3_S1413 in LSCC (Pearson r = 0.54).

Explore this scatter interactively →

Exploration