FBXO9

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FBXO9 mutation is significantly associated with the RNA expression of many other genes, with 1,113 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible FBXO9-associated genes across cancer lineages are MIR6877, MIR6766, and USP37P1. Each is linked with FBXO9 in more than 1 cancer types. Because this analysis shows association rather than direction, both FBXO9-to-partner and partner-to-FBXO9 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, MIR6877 grouped by FBXO9-low versus FBXO9-high in SKCM.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FBXO9→partner) and Y-score (partner→FBXO9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMMIR6877 →+0.468+3.875<.001.00632
UCECMIR6766 →+0.255+2.432<.001.00332
STADUSP37P1 →+0.150+5.026<.001.00932
BLCARPL22P13 →+0.163+4.208.005.00932
HNSCRNU6-956P →+0.763+7.954<.001.00832
SKCMCTBP2P9 →+0.041+4.495<.001.00732
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,113 associations by consensus.

MIR6877 by FBXO9 expression — SKCM

Box plot of MIR6877 in FBXO9-low vs FBXO9-high samples in SKCM.

Explore this box plot interactively →

Exploration