FBXO38

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, FBXO38 mutation is significantly associated with the RNA expression of many other genes, with 135 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible FBXO38-associated genes across cancer lineages are TLX3, CST9L, and GCAT. Each is linked with FBXO38 in more than 1 cancer types. Because this analysis shows association rather than direction, both FBXO38-to-partner and partner-to-FBXO38 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TLX3 grouped by FBXO38-low versus FBXO38-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (FBXO38→partner) and Y-score (partner→FBXO38) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaTLX3 →+2.054+3.266<.001.00332
SOFT_TISSUECST9L →+0.032+5.369<.001.00431
LARGE_INTESTINEGCAT →+1.146+3.364.005.00231
LARGE_INTESTINECBY1 →+0.579+3.160.003.00631
LARGE_INTESTINEIL7 →+0.789+3.451.005.00231
LARGE_INTESTINENDUFC1 →+0.660+3.364.002.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 135 associations by consensus.

TLX3 by FBXO38 expression — BLOOD_Leukemia

Box plot of TLX3 in FBXO38-low vs FBXO38-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration