FAM90A4P

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM90A4P RNA expression is significantly associated with the protein abundance of many other proteins, with 60 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible FAM90A4P-associated proteins across cancer lineages are S100A14, SGSM3_S406, and SLC16A2. Each is linked with FAM90A4P in more than 1 cancer types. Because this analysis shows association rather than direction, both FAM90A4P-to-partner and partner-to-FAM90A4P results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FAM90A4P versus S100A14 in PDAC, with a Pearson correlation of -0.36.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM90A4P→partner) and Y-score (partner→FAM90A4P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACS100A14 →-1.004-0.009<.001.00931
PDACSGSM3_S406 →-1.048-0.010.006.00731
PDACSLC16A2 →+0.647+0.060.007.00331
PDACCCM2L_S223 →+0.471+0.010.005.00531
PDACDCUN1D1 →-0.214-0.010.007.00831
PDACDENND4A_S1251 →+0.333+0.012.005.00831
Each partner links to its Q-omics profile. Showing the 6 strongest of 60 associations by consensus.

FAM90A4P vs S100A14 — PDAC

Per-sample scatter of FAM90A4P vs S100A14 in PDAC (Pearson r = -0.36).

Explore this scatter interactively →

Exploration